Publications

Scientific publications

2023

Wagner-Deyriès Margot, Varignier Léa, Revel Marion, Delhaye Thomas, Rondeau David, Coutellec Marie‐agnès, Mccairns R.J. Scott (2023). Variation of Tolerance to Isothiazolinones Among Daphnia pulex Clones. Environmental Toxicology and Chemistry, 2023, ⟨10.1002/etc.5564⟩

Le Roy Emilie, Spagnol Charlene (2023). Manuel de l'enquête activité du SIH. Aide à l’enquête sur l’activité des flottilles de pêche professionnelle . Protocole . https://archimer.ifremer.fr/doc/00335/44576/

Massé Cécile, Viard Frédérique, Humbert Suzie, Antajan Elvire, Auby Isabelle, Bachelet Guy, Bernard Guillaume, Bouchet Vincent M.P., Burel Thomas, Dauvin Jean-Claude, Delegrange Alice, Derrien-Courtel Sandrine, Droual Gabin, Gouillieux Benoît, Goulletquer Philippe, Guérin Laurent, Janson Anne-Laure, Jourde Jérôme, Labrune Céline, Lavesque Nicolas, Leclerc Jean-Charles, Le Duff Michel, Le Garrec Vincent, Noël Pierre, Nowaczyk Antoine, Pergent-Martini Christine, Pezi Jean-Philippe, Raoux Aurore, Raybaud Virginie, Ruitton Sandrine, Sauriau Pierre-Guy, Spilmont Nicolas, Thibault Delphine, Vincent Dorothée, Curd Amelia (2023). An Overview of Marine Non-Indigenous Species Found in Three Contrasting Biogeographic Metropolitan French Regions: Insights on Distribution, Origins and Pathways of Introduction . Diversity , 15(2), 161 (24p.) . Publisher's official version : https://doi.org/10.3390/d15020161 , Open Access version : https://archimer.ifremer.fr/doc/00817/92899/

Saulnier Erwan, Brind'Amour Anik, Lecomte Jean Baptiste, Piette Semeril Eloise, Trenkel Verena (2023). Temporal synchrony among juvenile marine fishes and potential climate and environmental drivers in the Bay of Biscay . Progress in Oceanography , 211, 102969 (11p.) . https://doi.org/10.1016/j.pocean.2023.102969

de Cubber Lola, Trenkel Verena, Diez Guzman, Gil-Herrera Juan, Novoa Pabon Ana Maria, Eme David, Lorance Pascal (2023). Robust identification of potential habitats of a rare demersal species (blackspot seabream) in the Northeast Atlantic . Ecological Modelling , 477, 110255 (13p.) . https://doi.org/10.1016/j.ecolmodel.2022.110255

Lejeune Benjamin, Marcout Anna, Kopp Dorothee, Morandeau Fabien, Mehault Sonia, Mouchet Maud Aline (2023). Assessing discard consumption dynamic in shallow coastal environment using underwater video . Fisheries Research , 260, 106587 (9p.) . https://doi.org/10.1016/j.fishres.2022.106587

Drouineau Hilaire, Moullec Fabien, Gascuel Didier, Laloë Francis, Lucas Sterenn, Bez Nicolas, Guillotreau Patrice, Guitton Jérôme, Hernvann Pierre-Yves, Huret Martin, Lehuta Sigrid, Léopold Marc, Mahévas Stephanie, Robert Marianne, Woillez Mathieu, Vermard Youen (2023). Food for thought from French scientists for a revised EU Common Fisheries Policy to protect marine ecosystems and enhance fisheries performance . Marine Policy , 148, 105460 (11p.) . https://doi.org/10.1016/j.marpol.2022.105460

Grandremy Nina, Romagnan Jean-Baptiste, Dupuy Christine, Doray Mathieu, Huret Martin, Petitgas Pierre (2023). Hydrology and small pelagic fish drive the spatio–temporal dynamics of springtime zooplankton assemblages over the Bay of Biscay continental shelf . Progress in Oceanography , 210, 102949 (18p.) . https://doi.org/10.1016/j.pocean.2022.102949

Menu Clara, Pecquerie Laure, Bacher Cedric, Doray Mathieu, Hattab Tarek, Van Der Kooij Jeroen, Huret Martin (2023). Testing the bottom-up hypothesis for the decline in size of anchovy and sardine across European waters through a bioenergetic modeling approach . Progress in Oceanography , 210, 102943 (20p.) . https://doi.org/10.1016/j.pocean.2022.102943

Elliott Sophie, Acou Anthony, Beaulaton Laurent, Guitton Jérôme, Réveillac Elodie, Rivot Etienne (2023). Modelling the distribution of rare and data-poor diadromous fish at sea for protected area management. Progress in Oceanography, 2023, 210, pp.1-15, 102924. ⟨10.1016/j.pocean.2022.102924⟩

Fabri-Ruiz Salome, Baudena A., Moullec Fabien, Lombard F., Irisson J.-O., Pedrotti M.L. (2023). Mistaking plastic for zooplankton: Risk assessment of plastic ingestion in the Mediterranean sea . Science Of The Total Environment , 856(Part.2), 159011 (11p.) . https://doi.org/10.1016/j.scitotenv.2022.159011

Drouineau Hilaire, Moullec Fabien, Gascuel Didier, Laloë Francis, Lucas Sterenn, Bez Nicolas, Guillotreau Patrice, Guitton Jérôme, Hernvann Pierre-Yves, Huret Martin, Lehuta Sigrid, Léopold Marc, Mahévas Stéphanie, Robert Marianne, Woillez Mathieu, Vermard Youen (2023). Food for thought from French scientists for a revised EU Common Fisheries Policy to protect marine ecosystems and enhance fisheries performance. Marine Policy, 2023, 148, pp.105460. ⟨10.1016/j.marpol.2022.105460⟩

2022

Souissi Ahmed, Besnard Anne-Laure, Evanno Guillaume (2022). A SNP marker to discriminate the european brook lamprey (Lampetra planeri), river lamprey (L. fluviatilis) and their hybrids. Molecular Biology Reports, 2022, 49 (10), pp.10115-10119. ⟨10.1007/s11033-022-07800-8⟩

Travers-Trolet Morgane (2022). Compte rendu de participation au groupe d'experts du CIEM sur la modélisation intégrative physique-biologie et écosystémique (WGIPEM). Texel/visioconférence, 24-27 octobre 2022 . RBE/ederu/CRWG-2022-13 .

Lehuta Sigrid (2022). Compte rendu de participation au groupe d'experts du CIEM sur les méthodes d'évaluation multi-spécifiques (WGSAM), Woods Hole, 10-14 octobre 2022 . RBE/ederu/CRWG-2022-16 .

Huret Martin, Menu Clara, Olmos Maxime (2022). Compte rendu de participation au groupe d’experts Joint ICES/PICES sur les petits poissons pélagiques (WGSPF), Lisbonne, Portugal, 12-13/11/2022 . RBE/ederu/CRWG-2022-19 .

Pawlowski Lionel, Duhamel Erwan, Olmos Maxime (2022). Compte rendu de participation au groupe d'experts du CIEM sur les petits poissons pélagiques (WGHANSA.), Lisbonne, Portugal, 21-25/11/2022 . RBE/ederu/CRWG-2022-20 .

Muller Alexandre, Auby Isabelle, Becheler Ronan, Boye Aurelien, Chevalier Mathieu, Droual Gabin, Dubois Stanislas, Fournier Jérôme, Nunes Flávia L. D. (2022). Functional traits of benthic marine invertebrates associated with eelgrass meadows in France . SEANOE . https://doi.org/10.17882/87709

Le Moigne Morgan, Gerigny Olivia, Curd Amelia, Droual Gabin (2022). Clean Atlantic. Tackling marine litter in the Atlantic Area . GDRPO2022 : Troisième rencontre du GDR Polymères et Océans 2022. 27-29 juin 2022, Brest, France .

Curd Amelia, Droual Gabin, Dubois Stanislas, Gauff Robin, Nunes Flavia, Taormina Bastien, Carlier Antoine (2022). Trialling 100 large-scale intertidal rock pools as an eco-engineering solution . Marineff International Conference 2022. 3rd-5th May 2022, Epron, France .

Brind'Amour Anik (2022). Compte rendu de participation au groupe d'experts du CIEM consacré à la biodiversité (WGBIODIV), visioconférence/hybride 7-11 février 2022 . RBE/ederu/CRWG-2022-12 .

Belmouhcine Abdelbadie, Simon Julien, Courtrai Luc, Lefevre Sebastien (2022). Fully Deep Simple Online Real-time Tracking: Efficient Re-Identification by Attention without Explicit Similarity Learning . 2022 26th International Conference on Pattern Recognition (ICPR), 2022, ISBN:978-1-6654-9063-4 pp. 3522-3528, .

Hernvann Pierre‐yves, Gascuel Didier, Kopp Dorothee, Robert Marianne, Rivot Etienne (2022). EcoDiet : A hierarchical Bayesian model to combine stomach, biotracer, and literature data into diet matrix estimation . Ecological Applications , 32(2), e2521 (19p.) . Publisher's official version : https://doi.org/10.1002/eap.2521 , Open Access version : https://archimer.ifremer.fr/doc/00741/85283/

Vincent Benoit, Robert Marianne, Simon Julien, Vacherot Jean-Philippe, Faillettaz Robin (2022). Exploring the mechanics of fish escape attempts through mesh . Fisheries Research , 248, 106195 (16p.) . Publisher's official version : https://doi.org/10.1016/j.fishres.2021.106195 , Open Access version : https://archimer.ifremer.fr/doc/00741/85335/

Pillet Marion, Chouvelon Tiphaine, Viricel-Pante Amélia, Doray Mathieu, Authier Matthieu, Huguet Antoine, Peltier Hélène, Faillettaz Robin, Dubroca Laurent, Gourguet Sophie, Ridoux Vincent, Lehuta Sigrid, Ulrich Clara, Petitgas Pierre, Spitz Jérôme (2022). DELMOGES. DELphinus MOuvements GEStion . Rapport intermédiaire 2022 . https://archimer.ifremer.fr/doc/00814/92594/

D'Hardivillé Céline, Bouche Ludovic (2022). Campagne d’évaluation du stock de Coquilles Saint Jacques dans les Courreaux de Belle-Ile et la baie de Quiberon 12, 13, 16 septembre 2022 .

D'Hardivillé Céline, Bouche Ludovic (2022). Campagne d’évaluation du stock de coques de Gâvres 4 avril 2022 .

D'Hardivillé Céline, Bouche Ludovic (2022). Campagne d’évaluation du stock de palourdes du Golfe du Morbihan 28,29,30 et 31 mars 2022 .

Biseau Alain, Baulier Loic, Lorance Pascal (2022). Décryptage de l’avis 2022 du CIEM sur les possibilités de pêche de la raie brunette (Raja undulata) en Manche . https://archimer.ifremer.fr/doc/00808/91959/

Sturbois A., Cozic A, Schaal G, Desroy N, Riera P, Le Pape Olivier, Le Mao P, Ponsero A, Carpentier Alexandre (2022). Stomach content and stable isotope analyses provide complementary insights into the trophic ecology of coastal temperate bentho-demersal assemblages under environmental and anthropogenic pressures. Marine Environmental Research, 2022, 182, pp.105770. ⟨10.1016/j.marenvres.2022.105770⟩

Baglinière Jean-Luc, Jeannot Nicolas, Nevoux Marie, Lamireau Ludivine, Lange Frédéric, Josset Quentin, Marchand Frédéric (2022). Guide pour l’interprétation des écailles et l’estimation de l’âge chez le saumon atlantique (salmo salar) dans les populations françaises. Office Français de la Biodiversité, 164 p., 2022, Guides et protocoles, 978-2-38170-146-2

ICES (2022). Working Group on Spatial Fisheries Data (WGSFD; outputs from 2021 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(92), 151p. Publisher's official version : https://doi.org/10.17895/ices.pub.21630236 , Open Access version : https://archimer.ifremer.fr/doc/00808/91969/

Magin Justus, Woillez Mathieu, Queric Antoine, Odaka Tina (2022). Pangeo for geolocating fish using biologging data . EGU General Assembly 2022. 23–27 May 2022, Vienna, Austria & Online .

Alglave Baptiste, Rivot Etienne, Etienne Marie-Pierre, Woillez Mathieu, Thorson James T, Vermard Youen (2022). Combining scientific survey and commercial catch data to map fish distribution . Ices Journal Of Marine Science , 79(4), 1133-1149 . https://doi.org/10.1093/icesjms/fsac032

Comité Approche Ecosystémique de l’Halieutique (2022). Consultation européenne 2022 sur la Politique Commune de la Pêche. Note de synthèse . RBE/CAEH/2022 .

Cresson Pierre, Bourgau Odile, Cordier Remy, Cure Clemence, Denamiel Margaux, Rouquette Manuel, Gay Mélanie (2022). Fish length- and fishing ground depth-driven variation of diet drives Anisakis levels in a zooplankton-feeding fish . SEANOE . https://doi.org/10.17882/91559

Hidalgo Manuel, Bartolino Valerio, Coll Marta, Hunsicker Mary E, Travers-Trolet Morgane, Browman Howard I (2022). ‘Adaptation science’ is needed to inform the sustainable management of the world's oceans in the face of climate change . Ices Journal Of Marine Science , 79(2), 457-462 . Publisher's official version : https://doi.org/10.1093/icesjms/fsac014 , Open Access version : https://archimer.ifremer.fr/doc/00765/87733/

Ballutaud Marine, Travers-Trolet Morgane, Marchal Paul, Dubois Stanislas, Giraldo Carolina, Parnell Andrew C., Nuche-Pascual M. Teresa, Lefebvre Sebastien (2022). Inferences to estimate consumer’s diet using stable isotopes: Insights from a dynamic mixing model . Plos One , 17(2), e0263454 (26p.) . Publisher's official version : https://doi.org/10.1371/journal.pone.0263454 , Open Access version : https://archimer.ifremer.fr/doc/00750/86215/

Beukhof Esther, Piet Gerjan, Uhlmann Sebastian, Brown Elliot John, Astarloa Amaia, Van Hoey Gert, Lynam Christopher, Spedicato Maria Teresa, Van Der Reijden Karin Johanna, Dinesen Grete E., Eigaard Ole Ritzau, Girardin Raphael, Halouani Ghassen, Basurko Oihane C., Altuna Miren, Garcia Dorleta, Romagnoni Giovanni, Carbonara Pierluigi, Smith Chris, Papadopoulou Nadia, Tsagarakis Konstantinos, Lefkaditou Eugenia, Anastasopoulou Katerina, Chatzispyrou Archontia, Kempf Alexander, Bernreuther Matthias, Festjens Felien, Seghers Stephie, Bluemel Joanna K, Thorpe Robert, Macmillan Isla, Potier Mikaëla, Binch Logan, Poos Jan Jaap, Depestele J. Jochen, Eliasen Søren, Kraan Marloes, Taylor Marc, Vassilopoulou Celia, Jacobsen Nis Sand, Rindorf Anna (2022). SEAwise Report on the key species and habitats impacted by fishing . WP4 Deliverable 4.1 . https://doi.org/10.11583/DTU.21269298

Rindorf Anna, Deurs Mikael, Howell Daniel, Andonegi Eider, Berger Aaron, Bogstad Bjarte, Cadigan Noel, Elvarsson Bjarki Þór, Hintzen Niels, Savina-Rolland Marie, Taylor Marc, Trijoulet Vanessa, Kooten Tobias, Zhang Fan, Collie Jeremy (2022). Strength and consistency of density dependence in marine fish productivity . Fish And Fisheries , 23(4), 812-828 . Publisher's official version : https://doi.org/10.1111/faf.12650 , Open Access version : https://archimer.ifremer.fr/doc/00753/86468/

Savina-Rolland Marie (2022). Dynamique des populations et écosystèmes exploités en milieu marin . HDR.

Savina-Rolland Marie, Rindorf Anna, Brown Elliot John, Neuenfeldt Stefan, Van Deurs Mikael, Carbonara Perluigi, Spedicato Maria Teresa, Pierrucci Andrea, Chust Guillem, Garcia Dorleta, Ibaibarriaga Leire, Taboada Fernando González, Depestele Jochen, Sys Klaas, Vansteenbrugge Lies, Einberg Heli, Ojaveer Henn, Fincham Jenni, Girardin Raphael, Halouani Ghassen, Lebigre Christophe, Munschy Catherine, Petitgas Pierre, Woillez Mathieu, Zambonino Infante Jose-Luis, Melià Paco, O’connor Bríd, Reid David, Uhlmann Sebastian, Papantoniou Georgia, Politikos Dimitrios, Tsagarakis Konstantinos, Valavanis Vasilis, Vassilopoulou Celia, Kempf Alexander, Taylor Marc, Ustups Didzis, Voss Rüdiger (2022). SEAwise. Report on the key drivers of stock productivity and future environmental scenarios . WP3 Deliverable 3.1 . https://doi.org/10.11583/DTU.21269295

Simonet Lea (2022). Trends in demersal populations' growth and condition: Bay of Biscay and Celtic Sea case studies .

Orenstein Eric C., Ayata Sakina‐dorothée, Maps Frédéric, Becker Érica C., Benedetti Fabio, Biard Tristan, de Garidel‐thoron Thibault, Ellen Jeffrey S., Ferrario Filippo, Giering Sarah L. C., Guy‐haim Tamar, Hoebeke Laura, Iversen Morten Hvitfeldt, Kiørboe Thomas, Lalonde Jean‐françois, Lana Arancha, Laviale Martin, Lombard Fabien, Lorimer Tom, Martini Séverine, Meyer Albin, Möller Klas Ove, Niehoff Barbara, Ohman Mark D., Pradalier Cédric, Romagnan Jean-Baptiste, Schröder Simon‐martin, Sonnet Virginie, Sosik Heidi M., Stemmann Lars S., Stock Michiel, Terbiyik‐kurt Tuba, Valcárcel‐pérez Nerea, Vilgrain Laure, Wacquet Guillaume, Waite Anya M., Irisson Jean‐olivier (2022). Machine learning techniques to characterize functional traits of plankton from image data . Limnology And Oceanography , 67(8), 1647-1669 . Publisher's official version : https://doi.org/10.1002/lno.12101 , Open Access version : https://archimer.ifremer.fr/doc/00782/89435/

Amelot Morgane, Cornic Maelle, Larivain Angela, Pawlowski Lionel (2022). Compte rendus d'atelier. Session 2 Atelier Stock à données limitées. 15 & 16 mars 2022 .

Pelletier Dominique, Leguen Guillaume, Rouxel Justin, Fauvarque Olivier, Merrien Claude, Le Bras Yvan, Le Viol Isabelle, Terre Terrillon Aouregan, Poisson-Quinton Emmanuel, Delliou Nathalie, Mesguich Sacha, Daheron Zoe, Boussange Maël, Audet Olivier (2022). Un protocole d’observation sous-marine des poissons et des habitats côtiers : du STAVIRO au KOSMOS . Journées Ti Low Coast. 8 et 9 septembre 2022, Brest .

Rouxel Justin, Fauvarque Olivier, Merrien Claude, Leguen Guillaume, Pelletier Dominique (2022). KOSMOS. Kit d'Observation Sous-Marine Open Source. Un outil pour la science citoyenne . Journée thématique Ti’low-COAST - Rencontre autour de l’observation et l’instrumentation « low cost » en domaine marin et côtier. 23 mai 2022, Brest . https://archimer.ifremer.fr/doc/00772/88396/

ICES (2022). Working Group on Ecosystem Assessment of Western European Shelf Seas (WGEAWESS). ICES Scientific Reports/Rapports scientifiques du CIEM , 4(79), 54p. Publisher's official version : https://doi.org/10.17895/ices.pub.21311535 , Open Access version : https://archimer.ifremer.fr/doc/00808/91968/

REPHYTOX - French Monitoring program for Phycotoxins in marine organisms (2022). REPHYTOX dataset. French Monitoring program for Phycotoxins in marine organisms. Data since 1987 . SEANOE . https://doi.org/10.17882/47251

REPHY - French Observation and Monitoring program for Phytoplankton and Hydrology in coastal waters (2022). REPHY dataset - French Observation and Monitoring program for Phytoplankton and Hydrology in coastal waters. Metropolitan data . SEANOE . https://doi.org/10.17882/47248

Gonse Marine, Laurans Martial, Woillez Mathieu (2022). Development of an acoustic telemetry network for a better understanding of spatial population dynamics and habitat use of marine resources . Rencontre Télémétrie 2022. 18-20 Octobre 2022, Cestas .

Woillez Mathieu, Laurans Martial, Gonse Marine, Graner Eider, Jouanneau Charlène, Couturier Lydie, Blanpain Olivier, Frangoudes Katia (2022). Fishers’ knowledge contributes to implement a fish tracking network in the English Channel . ICES ASC 2022 - ICES Annual Science Conference 2022. 19-22 september 2022, Dublin .

Robert Marianne, Pawlowski Lionel, Kopp Dorothee (2022). TrophicCS: Spatialized trophic data of the Celtic Sea continental shelf food web . Ecology , 103(8), e3708 (2p.) . Publisher's official version : https://doi.org/10.1002/ecy.3708 , Open Access version : https://archimer.ifremer.fr/doc/00790/90189/

Lejeune Benjamin, Mouchet Maud Aline, Mehault Sonia, Kopp Dorothee (2022). Gut content metabarcoding reveals potential importance of fisheries discards consumption in marine fauna . Canadian Journal Of Fisheries And Aquatic Sciences , 79(7), 1064-1073 . Publisher's official version : https://doi.org/10.1139/cjfas-2021-0267 , Open Access version : https://archimer.ifremer.fr/doc/00742/85447/

Lejeune Benjamin, Kopp Dorothee, Mehault Sonia, Mouchet Maud Aline (2022). Assessing the diet and trophic level of marine fauna in a fishing ground subject to discarding activity using stable isotopes . Plos One , 17(6), e0268758 (17p.) . Publisher's official version : https://doi.org/10.1371/journal.pone.0268758 , Open Access version : https://archimer.ifremer.fr/doc/00775/88706/

Everett Jason, Heneghan Ryan, Blanchard Julia, Suthers Iain, Pakhomov Evgeny, Sykes Patrick, Schoeman David, Baird Mark, Basedow Sünnje Linnéa, Błachowiak-Samołyk Katarzyna, Heath Michael, Hopcroft Russell, Huggett Jenny, Huret Martin, Kimmel David, Labat Jean-Philippe, Lopes Rubens, Marcolin Catarina, Nogueira Enrique, Noyon Margaux, Schultes Sabine, Sourisseau Marc, Swadling Kerrie, Trudnowska Emilia, Richardson Anthony (2022). Self-organisation of zooplankton communities produces similar food chain lengths throughout the ocean . Under Review Nature portfolio , (Version 1), 45p. Publisher's official version : https://doi.org/10.21203/rs.3.rs-1186379/v1 , Open Access version : https://archimer.ifremer.fr/doc/00767/87920/

Rouxel Justin, Fauvarque Olivier, Tardivel Morgan, Guyader Gerard, Coail Jean-Yves, Beriet Patrick, Forest Bertrand, Le Mestre Sophie, Huret Martin, Danielou Marie-Madeleine, Dreanno Catherine, Romagnan Jean-Baptiste (2022). In-flow imaging ZooCAM system for zooplankton counting, identification and classification . RBPGO9 - les 9èmes Rencontres Biologie-Physique du Grand Ouest 2022. 22-24 juin 2022, Brest. https://archimer.ifremer.fr/doc/00784/89574/

Catalan Ignacio, Bowlin Noelle, Bertrand Arnaud, Berg Florian, Del Favero Jana M., Garrido Susana, Gherardi Douglas F.M., Huret Martin, Kloppmann Matthias, Van Der Kooij Jeroen, Van Der Lingen Carl, de Souza Moraes Luiz Eduardo, Moyano Marta, Peck Myron, Polte Patrick, Riveiro Isabel, Takahashi Motomitsu, Vasquez Sebastian (2022). Worldwide appraisal of knowledge gaps in the space usage of SPF highlights across stock uncertainties and research priorities . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal.

Angelico Maria Manuel, Diaz Paz, Oliveira Paulo B., Tel Elena, Huret Martin (2022). Egg production estimation for Atlantic Iberian sardine using CUFES sampling. Implementation of a biophysical model to assess the egg vertical density distribution . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Ministère de l'agriculture et de l'alimentation Direction des Pêches Maritimes et de l'Aquaculture, CNPMEM, IFREMER (2022). Manuel de l’observateur à bord des navires de pêches commerciaux . Valable à partir de septembre 2021. Manuel de l’observateur embarqué – Programme ObsMer 2020 - 2023. RBE/HISSEO . https://archimer.ifremer.fr/doc/00664/77630/

Lorance Pascal, Trenkel Verena (2022). Catch data of Rajiformes from bottom trawl surveys in the Bay of Biscay 1973-2019 . SEANOE . https://doi.org/10.17882/90930

Ribeiro Figueiredo Ivone, Natário Isabel, Lorance Pascal, Carvalho M. Lucília (2022). A life cycle model to assess the abundance of black scabbardfish a widely distributed fish with cryptic migrations . Canadian Journal Of Fisheries And Aquatic Sciences , 79(11), 1977-1991 . Publisher's official version : https://doi.org/10.1139/cjfas-2021-0272 , Open Access version : https://archimer.ifremer.fr/doc/00779/89147/

ICES (2022). Working group on the biology and assessment of deep-sea fisheries resources (WGDEEP) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(40), 995pp. Publisher's official version : https://doi.org/10.17895/ices.pub.20037233 , Open Access version : https://archimer.ifremer.fr/doc/00810/92227/

Lorance Pascal (2022). Compte rendu de participation au groupe d'experts du CIEM sur les pêcheries et les espèces profondes (WGDEEP). Copenhague et par visio-conférence, 28 avril au 4 mai 2022 . RBE/ederu/CRWG-2022-10 .

Aguzzi Jacopo, Chatzievangelou Damianos, Robinson Nathan J., Bahamon Nixon, Berry Alan, Carreras Marc, Company Joan Batista, Costa Corrado, Del Rio Fernandez Joaquin, Falahzadeh Ahmad, Fifas Spyros, Flögel Sascha, Grinyó Jordi, Jónasson Jonas Pall, Jonsson Patrik, Lordan Colm, Lundy Mathieu, Marini Simone, Martinelli Michela, Masmitja Ivan, Mirimin Luca, Naseer Atif, Navarro Joan, Palomeras Narcis, Picardi Giacomo, Silva Cristina, Stefanni Sergio, Vigo Maria, Vila Yolanda, Weetman Adrian, Doyle Jennifer (2022). Advancing fishery-independent stock assessments for the Norway lobster (Nephrops norvegicus) with new monitoring technologies . Frontiers In Marine Science , 9, 969071 (18p.) . Publisher's official version : https://doi.org/10.3389/fmars.2022.969071 , Open Access version : https://archimer.ifremer.fr/doc/00797/90879/

Biseau Alain (2022). Diagnostic 2021 sur les ressources halieutiques débarquées par la pêche française (métropolitaine) . Ifremer , Ref. RBE/EDERU/RS/2022/1 , 40p. https://archimer.ifremer.fr/doc/00773/88470/

Berenshtein Igal, Faillettaz Robin, Irisson Jean-Oliver, Kiflawi Moshe, Siebeck Ulrike E., Leis Jeffery M., Paris Claire B. (2022). Evidence for a consistent use of external cues by marine fish larvae for orientation . Communications Biology , 5(1), 1307 (9p.) . Publisher's official version : https://doi.org/10.1038/s42003-022-04137-7 , Open Access version : https://archimer.ifremer.fr/doc/00808/92003/

Schlenker Lela S., Stieglitz John D., Greer Justin B., Faillettaz Robin, Lam Chi Hin, Hoenig Ronald H., Heuer Rachael M., McGuigan Charles J., Pasparakis Christina, Esch Emma B., Ménard Gabrielle M., Jaroszewski Alexandra L., Paris Claire B., Schlenk Daniel, Benetti Daniel D., Grosell Martin (2022). Brief Oil Exposure Reduces Fitness in Wild Gulf of Mexico Mahi-Mahi (Coryphaena hippurus) . Environmental Science & Technology , 56(18), 13019-13028 . https://doi.org/10.1021/acs.est.2c01783

Fabri-Ruiz Salome, Bernard Guillaume, Simplet Laure (2022). Réponse de l'Ifremer à une demande d’avis sur les rapports de suivi quinquennal 2017-2021 des concessions dites « Chassiron » . DREAL Nouvelle-Aquitaine - Direction Régionale de l’Environnement, de l’Aménagement et du Logement de Nouvelle‐Aquitaine, Service Environnement Industriel/DRC/Carrières et granulats marins, Poitiers , Ref. Ifremer DG/2022-1366 _ P9-22-053 - Courriel DREAL du 12 août 2022 , 10p.

Lebigre Christophe, Woillez Mathieu, Barone Herve, Mourot Jennyfer, Drogou Mickael, Le Goff Ronan, Servili Arianna, Hennebert Jana, Vanhomwegen Marine, Aerts Johan (2022). Temporal variations in scale cortisol indicate consistent local-and broad-scale constraints in a wild marine teleost fish . Marine Environmental Research , 182, 105783 (8p.) . https://doi.org/10.1016/j.marenvres.2022.105783

Lebigre Christophe, Aminot Yann, Munschy Catherine, Drogou Mickael, Le Goff Ronan, Briant Nicolas, Chouvelon Tiphaine (2022). Trace metal elements and organic contaminants are differently related to the growth and body condition of wild European sea bass juveniles . Aquatic Toxicology , 248, 106207 (10p.) . https://doi.org/10.1016/j.aquatox.2022.106207

Roy Amedee, Lebigre Christophe, Drogou Mickael, Woillez Mathieu (2022). Estimating abundance indices of juvenile fish in estuaries using Geostatistics: An example of European sea bass (Dicentrarchus labrax) . Estuarine Coastal And Shelf Science , 269, 107799 (13p.) . https://doi.org/10.1016/j.ecss.2022.107799

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Doray Mathieu, Carrera Pablo, Amorim Pedro, Moreno Anna, Duhamel Erwan, Boyra Guillermo, O'Donnell Ciaran, Santos Maria, Van Der Kooij Jeroen, Angelico Maria Manuel, Nunes Cristina, Rodriguez-Climent Silvia, Campanella Fabio, Ramos Fernando, Diaz Paz, Jimenez Paz, Petitgas Pierre, Huret Martin (2022). Anchovy and sardine springtime habitats in the European Atlantic area . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Doray Mathieu, Romagnan Jean-Baptiste, Petitgas Pierre, Huret Martin (2022). Combination of Continuous Underwater Fish Egg Sampler and acoustic data for estimating and mapping fish daily fecundity . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Doray Mathieu, Petitgas Pierre, Huret Martin, Hattab Tarek (2022). Space-time dynamics of size-structured clupeiformes communities in Atlantic and Mediterranean habitats . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Dorand Marine (2022). Indices de variabilité spatiale et temporelle de la chlorophylle a et de la température par Fonctions Orthogonales Empiriques (EOF) dans le golfe de Gascogne . Rapport de stage Master 2 mention Biodiversité, Écologie, Évolution, parcours Modélisation en écologie (MODE), Université de Rennes . https://archimer.ifremer.fr/doc/00779/89095/

Corrales X., Preciado I., Gascuel D., Lopez De Gamiz-Zearra A., Hernvann P.-Y., Mugerza E., Louzao M., Velasco F., Doray Mathieu, López-López L., Carrera P., Cotano U., Andonegi E. (2022). Structure and functioning of the Bay of Biscay ecosystem: A trophic modelling approach . Estuarine Coastal And Shelf Science , 264, 107658 (15p.) . Publisher's official version : https://doi.org/10.1016/j.ecss.2021.107658 , Open Access version : https://archimer.ifremer.fr/doc/00736/84785/

Van Der Kooij Jeroen, Moreno Ana, Uriarte Andres, O'Donnell Claran, Nunes Cristina, Nogueira Enrique, Duhamel Erwan, Campanella Fabio, Ramos Fernando, Costas Gersom, Boyra Guillermo, Riveiro Isabel, Romagnan Jean-Baptiste, Ibaibarriaga Leire, Iglesias Magdalena, Santos Maria, Huret Martin, Doray Mathieu, Carrera Pablo, Diaz Paz, Jimenez Paz, Amorim Pedro, Petitgas Pierre, Nash Richard, Rodriguez-Climent Silvia, Dominguez Rosario, Angelicao Maria Manuel (2022). Pelagic Ecosystem Surveying in NE Atlantic Waters: WGACEGG Internationally Coordinated Surveys . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Lindegren Martin, Huret Martin, Berg Florian, Boldt Jennifer, Cleary Jaclyn, Van Denderen Peter Daniel, Doray Mathieu, Hattab Tarek, Jacobsen Nis Sand, Van Der Kooij Jeroen, Kuriyama Peter, Ramos Fernando, Rincon Margarita R., Riveiro Isabel, Somarakis Stelios, Takahashi Motomitsu, Takasuka Akinori, Wise Laura (2022). A cross system comparison of internal and external forcing regulating growth of Small Pelagic Fish throughout ontogeny . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal.

Menu Clara, Pecquerie Laure, Bacher Cedric, Doray Mathieu, Hattab Tarek, Van Der Kooij Jeroen, Huret Martin (2022). Decreasing trend in size for small pelagic fish across European waters : bioenergetic modeling to explore the underlying individual to population scale processes . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal .

Huret Martin, Doray Mathieu, Daures Fabienne, Romagnan Jean-Baptiste, Alban Frederique, Duhamel Erwan, Hattab Tarek, Petitgas Pierre, Travers-Trolet Morgane, Lehuta Sigrid (2022). Fish quality impacts sardine fisheries through bottom-up and industry controls . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal.

Van Der Kooij Jeroen, Campanella Fabio, McKeown Niall, Boyra Guillermo, Doray Mathieu, Santos Maria, Huret Martin (2022). Northward range expansion of Bay of Biscay anchovy due to increased temperature envelope and population increase . International Symposium on Small Pelagic Fish: New Frontiers in Science for Sustainable Management. 7-11 November 2022 Lisbon, Portugal.

Guillemoles Jean-François, Retiere Nicolas, Azaïs Philippe, Ravel Guillaume (2022). Programme et Equipements Prioritaires de recherche sur Les Technologies Avancées des Systèmes Energétiques (TASE) / Priority Research Programme on Technologies for Advanced Energy Systems (TASE) . Strategic plan .

Le Luherne Emilie, Daverat Françoise, Woillez Mathieu, Pecheyran Christophe, de Pontual Helene (2022). Coupling natural and electronic tags to explore spawning site fidelity and natal homing in northeast Atlantic European seabass . Estuarine, Coastal and Shelf Science , 278, 108118 (11p.) . https://doi.org/10.1016/j.ecss.2022.108118

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Auber Arnaud, Waldock Conor, Maire Anthony, Goberville Eric, Albouy Camille, Algar Adam C., McLean Matthew, Brind'Amour Anik, Green Alison L., Tupper Mark, Vigliola Laurent, Kaschner Kristin, Kesner-Reyes Kathleen, Beger Maria, Tjiputra Jerry, Toussaint Aurèle, Violle Cyrille, Mouquet Nicolas, Thuiller Wilfried, Mouillot David (2022). A functional vulnerability framework for biodiversity conservation . Nature Communications , 13(1), 4774 (13p.) . Publisher's official version : https://doi.org/10.1038/s41467-022-32331-y , Open Access version : https://archimer.ifremer.fr/doc/00791/90253/

Van Audenhaege Loic, Matabos Marjolaine, Brind'Amour Anik, Drugmand Jonathan, Laes Agathe, Sarradin Pierre-Marie, Sarrazin Jozee (2022). Long-term monitoring reveals unprecedented stability of a vent mussel assemblage on the Mid-Atlantic Ridge . Progress In Oceanography , 204, 102791 (23p.) . https://doi.org/10.1016/j.pocean.2022.102791

Treguier Cathy, Bouche Ludovic, Gabellec Raoul (2022). Avis sur le projet de mise en repos – pêche à pied de loisir- secteurs Penthièvre baie et Sables blancs . DDTM 56 - Direction Départementale des Territoires et de la Mer du Morbihan, Délégation à la mer et au littoral, Service activités maritimes, Auray , Ref. LER/MPL/22.01 /Lo et Ref Avis P9 : 21-104. Votre mail du 20/12/2021 , 2p.

Vigier Audric, Bertignac Michel, Mahévas Stephanie (2022). Monthly spatial dynamics of the Bay of Biscay hake-sole-Norway lobster fishery: an ISIS-Fish database . Scientific Data , 9(1), 306 (12p.) . Publisher's official version : https://doi.org/10.1038/s41597-022-01408-0 , Open Access version : https://archimer.ifremer.fr/doc/00777/88899/

Merzereaud Mathieu, Macher Claire, Bertignac Michel, Fresard Marjolaine, Guyader Olivier, Le Grand Christelle, Gourguet Sophie, Briton Florence, Jaunatre Maxime (2022). IAM: Impact Assessment Model for fisheries management . Notice . https://archimer.ifremer.fr/doc/00784/89579/

Bertignac Michel, Lheureux Edel, Drogou Mickael, Woillez Mathieu (2022). Estimating migration and mortality rates for European sea bass (Dicentrarchus labrax) off the French coasts using electronic tagging data . ICES ASC 2022 - ICES Annual Science Conference 2022. 19-22 september 2022, Dublin .

Biseau Alain, Baulier Loic, Lorance Pascal (2022). Décryptage de l’avis 2022 du CIEM sur les possibilités de pêche de la raie brunette (raja undulata) en Manche . https://archimer.ifremer.fr/doc/00808/91959/

Scientific, Technical and Economic Committee for Fisheries (STECF) (2022). Skates & Rays Management (STECF-22-08) . ISBN ?? ISSN 1831-9424 DOI : ?? STECF ISSN 2467-0715 . https://archimer.ifremer.fr/doc/00810/92234/

ICES (2022). Benchmark Workshop for selected elasmobranch stocks (WKELASMO) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(47), 136pp. Publisher's official version : https://doi.org/10.17895/ices.pub.21025021 , Open Access version : https://archimer.ifremer.fr/doc/00810/92233/

ICES (2022). Working group on elasmobranch fishes (WGEF) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(74), 848p. Publisher's official version : https://doi.org/10.17895/ices.pub.21089833 , Open Access version : https://archimer.ifremer.fr/doc/00810/92230/

Méhault Sonia, Morandeau Fabien, Simon Julien, Faillettaz Robin, Abangan Alexa, Cortay Aurore, Kopp Dorothee (2022). Using fish behavior to design a fish pot: Black seabream (Spondyliosoma cantharus) case study . Frontiers In Marine Science , 9, 1009992. (9p.) . Publisher's official version : https://doi.org/10.3389/fmars.2022.1009992 , Open Access version : https://archimer.ifremer.fr/doc/00795/90708/

Bourillon Bastien, Feunteun Eric, Acou Anthony, Trancart Thomas, Teichert Nils, Belpaire Claude, Dufour Sylvie, Bustamante Paco, Aarestrup Kim, Walker Alan, Righton David (2022). Anthropogenic Contaminants Shape the Fitness of the Endangered European Eel: A Machine Learning Approach. Fishes, 2022, 7 (5), pp.274. ⟨10.3390/fishes7050274⟩

Elliott Sophie, Acou Anthony, Beaulaton Laurent, Guitton Jérôme, Réveillac Elodie, Rivot Etienne (2022). Modelling the distribution of rare and data-poor diadromous fish at sea for protected area management. 2022

Mathonnet I., Bouchemousse Sarah, Aubin Joël, Jaeger Christophe, Le Bris Hervé, Sadoul Bastien, Oms P.-E., Jacquemin B., Michel R. (2022). Assessement of environmental Monitoring methods for Integrated Management of Aquaculture in open sea: A MASS BALANCE MODEL APPROACH. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. 1 p., 2022

Bouchemousse Sarah, Béguin Ronan, Mathonnet Iroise, Aubin Joël, Jaeger Christophe, Le Bris Hervé, Sadoul Bastien, Le Bris Anthony, Oms Pierre-Emmanuel, Michel Rémy (2022). Evaluation des méthodes de suivi environnemental pour la gestion intégrée de l'aquaculture en mer : un cadre théorique. Journées de la recherche française piscicole, Jul 2022, Paris, France

Roussel Jean-Marc, Beaulaton Laurent (2022). Pôle Gestion des MIgrateurs AMphihalins dans leur Environnement -MIAME. Rapport d'activité 2021. Rapport annuel. OFB; INRAE; Institut Agro; UPPA. 2022, 30 p

Alglave Baptiste, Kristensen Kasper, Rivot Etienne, Woillez Mathieu, Vermard Youen, Etienne Marie-Pierre (2022). Inferring fine scale wild species distribution from spatially aggregated data. 2022

Lebigre Christophe, Turlure Camille, Vandewalle Hélène, Binard Fabian, Habel Jan Christian, Schtickzelle Nicolas (2022). Diverging effects of geographic distance and local habitat quality on the genetic characteristics of three butterfly species. Ecological Entomology, Wiley, 2022, 47 (5), pp.842-854. ⟨10.1111/een.13174⟩

Duval Eloïse, Quéméré Erwan, Loot Géraldine, Jacquin Lisa, Veyssière Charlotte, Blanchet Simon (2022). A multifaceted index of population health to detect risk-prone populations and underlying stressors in wildlife. Biological Conservation, Elsevier, 2022, 274, pp.109706. ⟨10.1016/j.biocon.2022.109706⟩

Semel Brandon, Karpanty Sarah, Semel Meredith, Stauffer Dean, Quéméré Erwan, Walters Jeffrey, Andrianiaina Angelo, Rakotonanahary Ando, Ranaivoson Tamby, Rasolonirina Dimbisoa, Vololonirina Faramalala (2022). Highly Variable Densities and a Decline in Critically Endangered Golden-Crowned Sifaka (Propithecus tattersalli) Abundance from 2008–2018. International Journal of Primatology, Springer Verlag, In press, ⟨10.1007/s10764-022-00314-x⟩

Rougemont Quentin, Perrier Charles, Besnard Anne-Laure, Lebel Isabelle, Abdallah Yann, Feunteun Eric, Réveillac Elodie, Lasne Emilien, Acou Anthony, Nachón David José, Cobo Fernando, Evanno Guillaume, Baglinière Jean-Luc, Launey Sophie (2022). Population genetics reveals divergent lineages and ongoing hybridization in a declining migratory fish species complex. Heredity, Nature Publishing Group, 2022, 129 (2), pp.137-151. ⟨10.1038/s41437-022-00547-9⟩

Pottier Gaétan, Bargier Nicolas, Bennevault Yoann, Vigouroux Régis, Azam Didier, Marchand Frédéric, Nevoux Marie, Roussel Jean-Marc (2022). Optimising electrofishing settings for shrimp and fish in shallow tropical streams. Fisheries Research, Elsevier, In press, 256, pp.106457. ⟨10.1016/j.fishres.2022.106457⟩

Gerber Rémi, Cabon Lilian, Piscart Christophe, Roussel Jean-Marc, Bergerot Benjamin (2022). Body stores of emergent aquatic insects are associated with body size, sex, swarming behaviour and dispersal strategies. Freshwater Biology, Wiley, In press, ⟨10.1111/fwb.14003⟩

Gerber Remi, Bergerot Benjamin, Georges Romain, Roussel Jean-Marc, Piscart Christophe (2022). The Role of Hydrographic Mapping in the Study of Emerging Aquatic Insects on the Landscape Scale. Water, 2022, 14 (19), pp.3019. ⟨10.3390/w14193019⟩

Lebot Clément, Prévost Etienne, Arago Marie-Andrée, Germis Gaëlle, Beaulaton Laurent, Nevoux Marie, Rivot Etienne (2022). Renovating the harvest regulation of angling fishery targeting Atlantic salmon in Brittany (France). International Year of Salmon Synthesis Symposium, Oct 2022, Vancouver, Canada

Cinner Joshua, Caldwell Iain, Thiault Lauric, Ben John, Blanchard Julia, Coll Marta, Diedrich Amy, Eddy Tyler, Everett Jason, Folberth Christian, Gascuel Didier, Guiet Jerome, Gurney Georgina, Heneghan Ryan, Jägermeyr Jonas, Jiddawi Narriman, Lahari Rachael, Kuange John, Liu Wenfeng, Maury Olivier, Müller Christoph, Novaglio Camilla, Palacios-Abrantes Juliano, Petrik Colleen, Rabearisoa Ando, Tittensor Derek, Wamukota Andrew, Pollnac Richard (2022). Potential impacts of climate change on agriculture and fisheries production in 72 tropical coastal communities. Nature Communications, Nature Publishing Group, 2022, 13 (1), pp.3530. ⟨10.1038/s41467-022-30991-4⟩

Edeline Eric, Starck Agnès, Bennevault Yoann, Paillisson Jean-Marc, Petit Eric (2022). Determinants of survival and dispersal along the range expansion of a biological invasion. 2022

Nevoux Marie, Marie Amandine, Raitif Julien, Baglinière Jean-Luc, Lorvelec Olivier, Roussel Jean-Marc (2022). Where does the rainbow end? A case study of self-sustaining rainbow trout Oncorhynchus mykiss populations in tropical rivers. 2022

Le Quinio Azénor, de Oliveira Eric, Girard Alexandre, Guillard Jean, Roussel Jean-Marc, Zaoui Fabrice, Martignac François (2022). Automatic detection, identification and counting of anguilliform fish using in situ acoustic camera data: development of a cross-camera morphological analysis approach. BioRxiv, In press, ⟨10.1101/2022.08.11.503684⟩

Diack Graeme, Bull Colin, Akenhead Scott, van der Stap Tim, Johnson Brett C., Rivot Etienne, Patin Rémi, Hernvann Pierre‐Yves, Schubert Aidan, Bird Tom, Saunders Mark, Crozier Walter (2022). Enhancing data mobilisation through a centralised data repository for Atlantic salmon (Salmo salar L.): Providing the resources to promote an ecosystem-based management framework.. Ecological Informatics, Elsevier, 2022, 70, ⟨10.1016/j.ecoinf.2022.101746⟩

Prévost Etienne, Lebot Clément, Arago Marie-Andrée, Beaulaton Laurent, Germis Gaëlle, Nevoux Marie, Rivot Etienne (2022). RENOSAUM : vers une nouvelle régulation de la pêche de loisir du saumon en Bretagne. Colloque international SAMARCH 2022 - Saumon et truite de mer : des outils au service de leur protection, May 2022, Pléneuf Val André, France

Cinner Joshua Eli, Caldwell Iain, Thiault Lauric, Ben John, Blanchard Julia, Coll Marta, Diedrich Amy, Eddy Tyler, Everett Jason, Folberth Christian, Gascuel Didier, Guiet Jerome, Gurney Georgina, Heneghan Ryan, Jägermeyr Jonas, Jiddawi Narriman, Lahari Rachael, Kuange John, Liu Wenfeng, Maury Olivier, Müller Christoph, Novaglio Camilla, Palacios-Abrantes Juliano, Petrik Colleen, Rabearisoa Ando, Tittensor Derek, Wamukota Andrew, Pollnac Richard (2022). The potential impacts of climate change on agriculture and fisheries production in 72 tropical coastal communities. 2022

Rozanski Romane, Trenkel Verena, Lorance Pascal, Valentini Alice, Dejean Tony, Pellissier Loïc, Eme David, Albouy Camille (2022). Disentangling the components of coastal fish biodiversity in southern Brittany by applying an environmental DNA approach . Environmental DNA , 4(4), 920-939 . Publisher's official version : https://doi.org/10.1002/edn3.305 , Open Access version : https://archimer.ifremer.fr/doc/00768/88002/

Barreau Thomas, Baulier Loic, Biais Gerard, Lorance Pascal (2022). Compte-rendu de participation au groupe d’experts du CIEM pour l’évaluation des stocks d'élasmobranches (WGEF). Lisbonne et à distance 14–23 juin 2022 . RBE/ederu/CRWG-2022-03 .

Sadoul Bastien, Caprioli Jean-Philippe, Barrier-Loiseau Chloé, Cimiterra Nicolas, Laugier Thierry, Lagarde Franck, Chary Killian, Callier Myriam, Guillermard Marine-Océane, Roque d'Orbcastel Emmanuelle (2022). Is Holothuria tubulosa the golden goose of ecological aquaculture in the Mediterranean Sea?. Aquaculture, 2022, 554, pp.738149. ⟨10.1016/j.aquaculture.2022.738149⟩

Simmons Olivia Meredith, Britton J. Robert, Gillingham Phillipa, Nevoux Marie, Riley William, Rivot Etienne, Gregory Stephen (2022). Predicting how environmental conditions and smolt body length when entering the marine environment impact individual Atlantic salmon Salmo salar adult return rates. Journal of Fish Biology, Wiley, 2022, 101 (2), pp.378-388. ⟨10.1111/jfb.14946⟩

Bull C, Gregory S, Rivot Etienne, Sheehan T, Ensing D, Woodward G, Crozier W (2022). The likely suspects framework: the need for a life cycle approach for managing Atlantic salmon ( Salmo salar ) stocks across multiple scales. ICES Journal of Marine Science, Oxford University Press (OUP), 2022, 79 (5), pp.1445-1456. ⟨10.1093/icesjms/fsac099⟩

Lobry Jérémy, Mounier Florence, Ballutaud Marine, Chevillot Xavier, Gascuel Didier, Budzinski Hélène, Labadie Pierre, Drouineau Hilaire (2022). ESCROpath , a Bayesian mixing model to quantify diets and trophic flows in aquatic food webs. Methods in Ecology and Evolution, Wiley, 2022, 13 (4), pp.894-907. ⟨10.1111/2041-210X.13808⟩

Corrales X., Preciado I., Gascuel Didier, Hernvann P.-Y., Mugerza E., Louzao M., Velasco F., Doray M., López-López L., Carrera P., Cotano U., Andonegi E., Lopez de Gamiz-Zearra A. (2022). Structure and functioning of the Bay of Biscay ecosystem: A trophic modelling approach. Estuarine, Coastal and Shelf Science, Elsevier, 2022, 264, pp.107658. ⟨10.1016/j.ecss.2021.107658⟩

Hernvann Pierre‐yves, Gascuel Didier, Kopp Dorothée, Robert Marianne, Rivot Etienne (2022). EcoDiet: A hierarchical Bayesian model to combine stomach, biotracer, and literature data into diet matrix estimation. Ecological Applications, Ecological Society of America, 2022, 32 (2), ⟨10.1002/eap.2521⟩

Roussel Jean-Marc, Pottier Gaétan, Servanti Sabrina, Beaulaton Laurent (2022). Partie D – Livrets de protocoles de pêche à l’électricité : VIGITRUITE ® , indice d'abondance truite (IAT). La pêche scientifique à l’électricité dans les milieux aquatiques continentaux, INRAE; OFB, 2022

Soumah Mohamed, Camara Ousmane, Diallo Ibrahima, Jouffre Didier, Jeremias Francisco Intchama, Pinto Josepha, Meissa Habib Beyah, Quemper Florian, Gascuel Didier, Guitton Jérôme (2022). Evolution de l’abondance de Pseudotolithus elongatus en Guinée / Guinée-Bissau. [Rapport de recherche] Institut Agro; CNSHB, Centre national des ressources halieutique de Boussoura; CIPA, Centro de Investigação Pesqueira Aplicada; IRD - Institut de recherche pour le developpement. 2022

Soumah Mohamed, Camara Ousmane, Diallo Ibrahima, Jouffre Didier, Intchama Jeremias Francisco, Pinto Josepha, Beyah Meissa Habib, Quemper Florian, Gascuel Didier, Guitton Jérôme (2022). Trends in abondance indices of Pagrus caeruleostictus in Guinea / Guinea-Bissau. [Rapport de recherche] Institut Agro; CNSHB, Centre national des ressources halieutique de Boussoura; CIPA, Centro de Investigação Pesqueira Aplicada. 2022, 40 p

Tfeil Brahim Mohamed, Habib Beyah Meissa, Quemper Florian, Gascuel Didier, Guitton Jérôme (2022). Trends in Abundance Indices of Epinephelus Aeneus in Mauritania. [Rapport de recherche] Institut Agro; IMROP. Institut Mauritanien de Recherches Océanographiques et des Pêches. 2022

Thiaw Modou, Bâ Kamarel, Habib Beyah Meissa, Quemper Florian, Gascuel Didier, Guitton Jérôme (2022). Evolution de l’abondance du thiof Epinephelus aeneus au Sénégal. [Rapport de recherche] Institut Agro; CRODT; IMROP. 2022

Lebigre Christophe, Aminot yann, Munschy Catherine, Drogou Mickaël, Le Goff Ronan, Briant Nicolas, Chouvelon Tiphaine (2022). Trace metal elements and organic contaminants are differently related to the growth and body condition of wild European sea bass juveniles. Aquatic Toxicology, Elsevier, 2022, 248, pp.106207. ⟨10.1016/j.aquatox.2022.106207⟩

Roy Amédée, Lebigre Christophe, Drogou Mickaël, Woillez Mathieu (2022). Estimating abundance indices of juvenile fish in estuaries using Geostatistics: An example of European sea bass (Dicentrarchus labrax). Estuarine, Coastal and Shelf Science, Elsevier, 2022, 269, pp.107799. ⟨10.1016/j.ecss.2022.107799⟩

Médieu Anaïs, Point David, Itai Takaaki, Angot Hélène, Buchanan Pearse, Allain Valérie, Fuller Leanne, Griffiths Shane, Gillikin David, Sonke Jeroen, Heimbürger-Boavida Lars-Eric, Desgranges Marie-Maëlle, Menkes Christophe, Madigan Daniel, Gauthier Olivier, Brosset Pablo, Tagliabue Alessandro, Bopp Laurent, Verheyden Anouk, Lorrain Anne (2022). Evidence that Pacific tuna mercury levels are driven by marine methylmercury production and anthropogenic inputs. Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, 2022, 119 (2), pp.e2113032119. ⟨10.1073/pnas.2113032119⟩

Bertrand Mathilde, Brosset Pablo, Soudant Philippe, Lebigre Christophe (2022). Spatial and ontogenetic variations in sardine feeding conditions in the Bay of Biscay through fatty acid composition. Marine Environmental Research, Elsevier science, 2022, 173, 105514, 12 p. ⟨10.1016/j.marenvres.2021.105514⟩

Brazier Thomas, Cherif Emira, Martin Jean-François, Gilles André, Blanchet Simon, Zhao yahui, Combe Marine, Mccairns R. J. S., Gozlan Rodolphe E. (2022). The influence of native populations' genetic history on the reconstruction of invasion routes: the case of a highly invasive aquatic species. Biological Invasions, Springer Verlag, In press, ⟨10.1007/s10530-022-02787-6⟩

Gervais Laura, Morellet Nicolas, David Ingrid, Hewison Mark, Réale Denis, Goulard Michel, Chaval yannick, Lourtet Bruno, Cargnelutti Bruno, Merlet Joel, Quéméré Erwan, Pujol Benoît (2022). Quantifying heritability and estimating evolutionary potential in the wild when individuals that share genes also share environments. Journal of Animal Ecology, Wiley, 2022, 12p. ⟨10.1111/1365-2656.13677⟩

Sadoul Bastien, Alfonso Sébastien, Goold Conor, Pratlong Marine, Rialle Stéphanie, Geffroy Benjamin, Bégout Marie-Laure (2022). Transcriptomic profiles of consistent risk-taking behaviour across time and contexts in European sea bass. Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2022, 289 (1975), ⟨10.1098/rspb.2022.0399⟩

Raitif Julien, Roussel Jean-Marc, Olmos Maxime, Piscart Christophe, Plantegenest Manuel (2022). Assessing spatial deposition of aquatic subsidies by insects emerging from agricultural streams. Science of the Total Environment, Elsevier, 2022, 837, pp.155686. ⟨10.1016/j.scitotenv.2022.155686⟩

Soissons Laura M., Thomas Alban, Roussel Jean -Marc, Roussel Jean-Marc (2022). Rapport d'activités 2021 - cellule de coordination Sélune. [Rapport Technique] INRAE UMR ESE. 2022, 3 p

Alglave Baptiste, Rivot Etienne, Etienne Marie-Pierre, Woillez Mathieu, Thorson James, Vermard youen (2022). Combining scientific survey and commercial catch data to map fish distribution. ICES Journal of Marine Science, Oxford University Press (OUP), 2022, ⟨10.1093/icesjms/fsac032⟩

Lebot Clément, Arago Marie-Andrée, Beaulaton Laurent, Germis Gaëlle, Nevoux Marie, Rivot Etienne, Prévost Etienne (2022). Taking full advantage of the diverse assemblage of data at hand to produce time series of abundance. A case study on Atlantic salmon populations of Brittany. Canadian Journal of Fisheries and Aquatic Sciences, NRC Research Press, 2022, 79 (4), pp.533-547. ⟨10.1139/cjfas-2020-0368⟩

Alglave Baptiste, Vermard youen, Rivot Etienne, Etienne Marie-Pierre, Woillez Mathieu (2022). Identifying fish spawning grounds by combining catch declarations and scientific survey data. 2022

Gascuel Didier (2022). La pêche et les écosystèmes marins : deux scénarios. Futuribles, Association Futuribles, 2022, N° 447 (2), pp.51-63. ⟨10.3917/futur.447.0051⟩

Desroy Nicolas, Woillez Mathieu, Simplet Laure (2022). Réponse de l'Ifremer à la demande d'avis sur le dossier de Déclaration d’Arrêt Définitif de Travaux miniers (DADT) sur la concession Pointe d’Armor . DREAL Bretagne - Direction Régionale de l'Environnement, de l'Aménagement et du Logement de Bretagne, Service de Prévention des Pollutions et des Risques, Division Risques Chroniques, Rennes , Ref. Ifremer DG 2022.25 - Courriel DREAL Bretagne du 15 novembre 2021 , 3p.

Alglave Baptiste, Rivot Etienne, Etienne Marie-Pierre, Woillez Mathieu, Thorson James T, Vermard Youen (2022). Combining scientific survey and commercial catch data to map fish distribution . ICES Journal of Marine Science , 79(4), 1133-1149 . https://doi.org/10.1093/icesjms/fsac032

Eme David, Rufino Marta, Trenkel Verena, Vermard Youen, Laffargue Pascal, Petitgas Pierre, Pellissier Loïc, Albouy Camille (2022). Contrasted spatio-temporal changes in the demersal fish assemblages and the dominance of the environment vs fishing pressure, in the Bay of Biscay and Celtic Sea . Progress in Oceanography , 204, 102788 (13p.) . https://doi.org/10.1016/j.pocean.2022.102788

Trenkel Verena, Charrier Gregory, Lorance Pascal, Bravington Mark V (2022). Close-kin mark–recapture abundance estimation: practical insights and lessons learned . Ices Journal Of Marine Science , 79(2), 413-422 . Publisher's official version : https://doi.org/10.1093/icesjms/fsac002 , Open Access version : https://archimer.ifremer.fr/doc/00747/85896/

Hidalgo Manuel, Bartolino Valerio, Coll Marta, Hunsicker Mary E, Travers-Trolet Morgane, Browman Howard I (2022). ‘Adaptation science’ is needed to inform the sustainable management of the world's oceans in the face of climate change . ICES Journal of Marine Science , 79(2), 457-462 . Publisher's official version : https://doi.org/10.1093/icesjms/fsac014 , Open Access version : https://archimer.ifremer.fr/doc/00765/87733/

Ballutaud Marine, Travers-Trolet Morgane, Marchal Paul, Dubois Stanislas, Giraldo Carolina, Parnell Andrew C., Nuche-Pascual M. Teresa, Lefebvre Sebastien (2022). Inferences to estimate consumer’s diet using stable isotopes: Insights from a dynamic mixing model . PLOS ONE , 17(2), e0263454 (26p.) . Publisher's official version : https://doi.org/10.1371/journal.pone.0263454 , Open Access version : https://archimer.ifremer.fr/doc/00750/86215/

Danto Jules, Daures Fabienne, Desroy Nicolas, Savina-Rolland Marie, Vermard Youen, Zambonino Infante Jose-Luis (2022). Projet SCEDUR. Identification des indicateurs de durabilité de la pêche française . RBE/HALGO/LTBH.2021-10 . https://doi.org/10.13155/87378

ICES (2022). Working group on machine learning in marine science (WGMLEARN; Outputs from 2021 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(15), 16p. Publisher's official version : https://doi.org/10.17895/ices.pub.10060 , Open Access version : https://archimer.ifremer.fr/doc/00754/86646/

ICES (2022). Working Group on Mixed Fisheries Advice (WGMIXFISH-ADVICE; outputs from 2021 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(4), 215pp. Publisher's official version : https://doi.org/10.17895/ices.pub.9379 , Open Access version : https://archimer.ifremer.fr/doc/00745/85677/

Mehault Sonia, Morandeau Fabien, Morfin Marie, Sourget Quiterie (2022). PROJET « CAPS » : Cellule d’APpui à la Sélectivité . https://archimer.ifremer.fr/doc/00767/87885/

ICES (2022). Joint ICES/EUROMARINE Workshop on Common Conceptual Mapping Methodologies (WKCCMM; Outputs from 2021 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(19), 41p. Publisher's official version : https://doi.org/10.17895/ices.pub.10095 , Open Access version : https://archimer.ifremer.fr/doc/00754/86648/

ICES (2022). Workshop on the Further Development of the New IBTS Gear (WKFDNG) . ICES Scientific Reports/Rapports scientifiques du CIEM , 4(18), 46p. Publisher's official version : https://doi.org/10.17895/ices.pub.10094 , Open Access version : https://archimer.ifremer.fr/doc/00754/86647/

Robert Marianne, Pawlowski Lionel, Kopp Dorothee (2022). TrophicCS: Spatialized trophic data of the Celtic Sea continental shelf food web . SEANOE . https://doi.org/10.17882/81149

Mérillet Laurene, Robert Marianne, Hernvann Pierre-Yves, Pecuchet Laurène, Pavoine Sandrine, Mouchet Maud, Primicerio Raul, Kopp Dorothee (2022). Effects of life-history traits and network topological characteristics on the robustness of marine food webs . Global Ecology And Conservation , 34, e02048 (17p.) . Publisher's official version : https://doi.org/10.1016/j.gecco.2022.e02048 , Open Access version : https://archimer.ifremer.fr/doc/00751/86259/

Hernvann Pierre‐yves, Gascuel Didier, Kopp Dorothee, Robert Marianne, Rivot Etienne (2022). EcoDiet : A hierarchical Bayesian model to combine stomach, biotracer, and literature data into diet matrix estimation . Ecological Applications , 32(2), e2521 (19p.) . https://doi.org/10.1002/eap.2521

Everett Jason, Heneghan Ryan, Blanchard Julia, Suthers Iain, Pakhomov Evgeny, Sykes Patrick, Schoeman David, Baird Mark, Basedow Sünnje Linnéa, Błachowiak-Samołyk Katarzyna, Heath Michael, Hopcroft Russell, Huggett Jenny, Huret Martin, Kimmel David, Labat Jean-Philippe, Lopes Rubens, Marcolin Catarina, Nogueira Enrique, Noyon Margaux, Schultes Sabine, Sourisseau Marc, Swadling Kerrie, Trudnowska Emilia, Richardson Anthony (2022). Self-organisation of zooplankton communities produces similar food chain lengths throughout the ocean . Preprint , (Version 1), 45p. Publisher's official version : https://doi.org/10.21203/rs.3.rs-1186379/v1 , Open Access version : https://archimer.ifremer.fr/doc/00767/87920/

Vincent Benoit, Robert Marianne, Simon Julien, Vacherot Jean-Philippe, Faillettaz Robin (2022). Exploring the mechanics of fish escape attempts through mesh . Fisheries Research , 248, 106195 (16p.) . https://doi.org/10.1016/j.fishres.2021.106195

Roy Amedee, Lebigre Christophe, Drogou Mickael, Woillez Mathieu (2022). Estimating abundance indices of juvenile fish in estuaries using Geostatistics: An example of European sea bass (Dicentrarchus labrax) . Estuarine, Coastal and Shelf Science , 269, 107799 (13p.) . https://doi.org/10.1016/j.ecss.2022.107799

Le Goff Ronan, Drogou Mickael, Lebigre Christophe, Woillez Mathieu, Cornou Anne Sophie, Berthele Olivier, Delaunay Damien, Martin Stephane, Le Ru Loic, Barone Herve, Bouche Ludovic, Roy Amedee, Le Roy Didier, Huet Jerome, Garren Francois, Edin Lea, Michelet Nicolas, Denize Sandra, Nguyen Pascal, Nfis Fayza, Le Roy Emilie, Marhic Cindy, Mahe Kelig, Weiss Jerome (2022). NourDem 2019-2021. Rapport final . RST-RBE/STH 2022-1 . https://doi.org/10.13155/87408

Doray Mathieu, Duhamel Erwan, Sanchez Florence, Berger Laurent (2022). MOVIES3D example dataset . SEANOE . https://doi.org/10.17882/58652

Doray Mathieu, Duhamel Erwan, Boiron-Leroy Anne, Marchand Laetitia, Bled--Defruit Geoffrey, Petitgas Pierre (2022). Mean length and weight at-age of anchovy and sardine estimated during the PELGAS survey in the Bay of Biscay in springtime . SEANOE . https://doi.org/10.17882/88357

Corrales X., Preciado I., Gascuel D., Lopez De Gamiz-Zearra A., Hernvann P.-Y., Mugerza E., Louzao M., Velasco F., Doray Mathieu, López-López L., Carrera P., Cotano U., Andonegi E. (2022). Structure and functioning of the Bay of Biscay ecosystem: A trophic modelling approach . Estuarine Coastal And Shelf Science , 264, 107658 (15p.) . https://doi.org/10.1016/j.ecss.2021.107658

Van Audenhaege Loic, Matabos Marjolaine, Courant Valentin, Jaulin Emmanuel, Raffault Clarisse, Le Goffic Léa, Drugmand Jonathan, Brind'Amour Anik, Laes Agathe, Sarradin Pierre-Marie, Sarrazin Jozee (2022). Compilation of image annotations and environmental data of 7 years of monitoring of hydrothermal assemblages using the TEMPO ecological module (EMSO-Azores observatory) . SEANOE . https://doi.org/10.17882/84672

Van Audenhaege Loic, Matabos Marjolaine, Brind'Amour Anik, Drugmand Jonathan, Laes Agathe, Sarradin Pierre-Marie, Sarrazin Jozee (2022). Long-term monitoring reveals unprecedented stability of a vent mussel assemblage on the Mid-Atlantic Ridge . Progress in Oceanography , 204, 102791 (23p.) . https://doi.org/10.1016/j.pocean.2022.102791

Le Gall Yves, Blanchet Aline, Brind'Amour Anik, Verney Romaric, Simplet Laure (2022). Avis de l’Ifremer sur la demande de prolongation du permis exclusif de recherches de sables et graviers siliceux marins dénommé «PER Sud-Atlantique » et d'autorisation d'ouverture de travaux de recherches sur le plateau continental au large de l’estuaire de la Gironde . DDTM 33 - Direction Départementale des Territoires et de la Mer de Gironde, Service des Procédure Environnementales, Unité Protection de l’Environnement et des Sites , Ref. Ifremer DG 22-629 (P9 22-026) - Courrier DDTM du 13 janvier 2022 , 9p.

Blanchet Aline, Verney Romaric, Le Gac Solene, Brind'Amour Anik, Fabri-Ruiz Salome, Bruneau Audrey, Deborde Jonathan, Simplet Laure (2022). Réponse de l'Ifremer aux demandes simultanées de prolongation de la validité des concessions dites « Chassiron B » et « Chassiron D », d'autorisation de travaux miniers et d'autorisation d'occupation temporaire du domaine public maritime . Préfecture de la Charente Maritime, Secrétariat Général, Direction de la coordination et de l’appui territorial, Bureau de l’Environnement, La Rochelle , Ref. Ifremer DG/2022-502 _ P9-22-018 - Courrier Préfecture du 13 décembre 2021 , 15p.

Reddin Carl J, Decottignies Priscilla, Bacouillard Lise, Barille Laurent, Dubois Stanislas, Echappe Caroline, Gernez Pierre, Jesus Bruno, Meleder Vona, Natscher Paulina S., Turpin Vincent, Zeppilli Daniela, Zwerschke Nadescha, Brind'Amour Anik, Cognie Bruno (2022). Extensive spatial impacts of oyster reefs on an intertidal mudflat community via predator facilitation . Communications Biology , 5(1), 250 (11p.) . Publisher's official version : https://doi.org/10.1038/s42003-022-03192-4 , Open Access version : https://archimer.ifremer.fr/doc/00759/87134/

Delmas Lucile, Chao Marie-Laure, Alunno Bruscia Marianne, Biseau Alain, Daniel Anne, Buchet Remi, Rocq Sophie, Boulben Sylviane, Renault Tristan, Riou Philippe, Le Pivert Olivier, Wessel Nathalie, Mauffret Aourell, Brun Melanie, Lefebvre Alain, Devreker David, Robert Alexandre, Boye Aurelien, Brind'Amour Anik, Delaunay Damien, Regimbart Amelie, Foucher Eric, Gerigny Olivia, Galgani Francois, Mongruel Remi, Bas Adeline, Le Gentil Eric (2022). DCSMM - DCE. L’appui aux politiques publiques : Cadre d’intervention, enjeux et perspectives. Séminaire DCSMM - DCE. 18 et 19 janvier 2022. Ordre du jour, Compte-rendu et Présentations .

Vigier Audric, Bertignac Michel, Mahevas Stephanie (2022). An ISIS-Fish database describing monthly spatial dynamics of the Bay of Biscay mixed demersal fishery . SEANOE . https://doi.org/10.17882/86233