FABRI-RUIZ Salomé
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Theme(s) : Spatial dynamics, connectivity, habitat and functional area
Ecosystems assessment and multiple anthrophic pressure
Address: IFREMER Keywords : Aire de répartition géographique / Ecologie spatiale / Epigénétique / Habitats essentiels / Multi-stress / Niche écologique / Stress abiotique / Stress biotique / Traits d’histoire de vie / Allocation d’énergie / Changement climatique / Communautés / Pêche / Poissons / Populations / ADNe / Développement de scripts / Modélisation individu-centrée / Modélisation mécaniste / Modélisation statistique / Statistiques multivariées  |
My research aims to better understand the factors that shape and constrain the distribution of marine species, as well as to quantify the impacts of multiple anthropogenic pressures on marine ecosystems, including climate change, marine renewable energies, fishing, and the exploitation of marine resources.
To this end, I develop and apply a range of numerical approaches, including statistical methods such as ecological niche models, community models and Close-Kin Mark-Recapture (CKMR), as well as mechanistic approaches such as Dynamic Energy Budget models. I also contribute to the development of indicators, such as ELFI-C, to assess the ecological status of coastal ecosystems within the NOURPIE project.
I am also interested in the development of molecular approaches, particularly epigenetic methods, to estimate the biological and chronological age of ray and fish species. These approaches are combined with physiological markers in order to better quantify their stress status within the AGEPPOP project.
Finally, I contribute to the deployment of environmental DNA sampling methods within the EMOI and Hinsight projects.
Current projects
Genetic and physiological approach to assess the health status of ray populations | Timeframe : 2023 - 2026 Keywords : Dynamique des populations / Epigénétique / Multi-stress / Individus / Pêche / Poissons / Populations / Bio-informatique / Biomarqueurs et traceurs / Capture, échantillonnage et inventaire / Développement de scripts / Géomatique / Marquage-recapture / Modélisation statistique |
| Timeframe : 2024 - 2026 Keywords : Epigénétique / Habitats essentiels / Usages / Communautés / Poissons / Politiques publiques / Populations / Analyses de séries temporelles / Développement de scripts / Modélisation statistique / Statistiques multivariées |
Suivi des nourriceries côtières du parc naturel marin EGMP : Interprétation et analyse | Timeframe : 2023 - 2025 Keywords : Aire de répartition géographique / Cycle de vie / Ecologie spatiale / Habitats essentiels / Communautés / Poissons / Politiques publiques / Analyses de séries temporelles / Capture, échantillonnage et inventaire / Développement de scripts / Modélisation statistique |
I am involved in providing scientific support to public policy, particularly through the definition of standard protocols for the environmental monitoring of offshore wind farms, the expert assessment of monitoring programmes carried out at these sites for the fish compartment, and the evaluation of environmental monitoring programmes related to the extraction of marine aggregates.
Publications
Selection of Scientific Products
Posa Luca, Buton Angelique J., Khasnavis Anita M., Miracle Sophia A., Albers Kathryn M., Fanelli Matthew J., Le Timmy, Gamble Mackenzie, McDonald Ashley K., Martin Gilles, Fabri-Ruiz Salome, Freyberg Zachary, Logan Ryan W., Puig Stephanie (2026). Keratinocytes and PDGF-B/PDGFRβ signaling modulate peripheral opioid tolerance . Iscience , 29(7), 116634 (24p.) . https://doi.org/10.1016/j.isci.2026.116634 . https://archimer.ifremer.fr/doc/01071/118258/
Brosset Pablo, Jamme Tino, Sadoul Bastien, Vlach Manuel, Lorance Pascal, Rioux Vincent, Fabri‐ruiz Salome (2026). Fatty acid profiles of muscle and liver reveal ontogenetic shifts in diet and reproductive investment in an undulate ray from the Bay of Biscay (northeast Atlantic) . Journal Of Fish Biology , 109(1), 189-200 . https://doi.org/10.1111/jfb.70376
Bernard Guillaume, Buchet Rémi, Cuif Marion (coord.), Fabri-Ruiz Salome, Menet Florence, Robert Alexandre, Romagnan Jean-Baptiste (2026). Rapport d’expertise sur les protocoles (V2) pour l’état initial de l’environnement de la zone « Golfe de Gascogne Sud » (AO10 - GGS) . Direction Générale de l’Énergie et du Climat (DGEC), Paris-La Défense , Ref. DGD-S/26041 , 9p. https://archimer.ifremer.fr/doc/01071/118276/
Bernard Guillaume, Buchet Rémi, Cuif Marion (coord.), Fabri-Ruiz Salome, Romagnan Jean-Baptiste (2026). Rapport d’expertise de l’Ifremer sur la synthèse bibliographique (V1) pour l’état initial de l’environnement de la zone « Golfe de Gascogne Sud » (AO10 - GGS) . Direction Générale de l’Énergie et du Climat (DGEC), Paris-La Défense , Ref. DGD-S/26021 , 12p. https://archimer.ifremer.fr/doc/01071/118275/
Lespagnol Pierre, Lame Alicia, Fabri-Ruiz Salome, Delaunay Damien, Régimbart Amélie, Brind'Amour Anik (2026). Toward a population-based assessment of ecological status: methodological considerations based on the ELFI-C multi-metric index . Isobay 19 - The 19th International Symposium on Oceanography of the Bay of Biscay. June 16-18 2026, Donostia-San Sebastian .
Lame Alicia, Fabri-Ruiz Salome, Delaunay Damien, Mauffret Aourell, Brun Mélanie, Régimbart Amélie, Brind'Amour Anik (2026). Mapping Pressures on Coastal Fish Nurseries in the Bay of Biscay . Isobay 19 - The 19th International Symposium on Oceanography of the Bay of Biscay. June 16-18 2026, Donostia-San Sebastian .
Cuif Marion, Doray Mathieu, Fabri-Ruiz Salome, Loots Christophe (2026). Rapport d’expertise de l’Ifremer sur les protocoles (V1) pour l’état initial de l’environnement de la zone « Golfe de Gascogne Sud » (AO10 - GGS) . Direction Générale de l’Energie et du Climat (DGEC) , Ref. DGD-S/26011 , 8p. https://archimer.ifremer.fr/doc/01013/112446/
Lehmann Jeremie, Normand Julien, Lefebvre Alain, Hernandez Farinas Tania, Mertens Kenneth, Terre Terrillon Aouregan, Bilien Gwenael, Francoise Sylvaine, Soudant Dominique, Huguet Antoine, Rebout-Delpuech Colas, Amouroux Isabelle, Buchet Rémi, Herlory Olivier, Le Bourhis Enored, Brach-Papa Christophe, Dufois Francois, Woillez Mathieu, Fabri-Ruiz Salome, Dubroca Laurent, Germain Gregory, Bothorel Pierre, Ponte Aurelien, Mopin Irene, Touzeau Alexandra, Quimbert Erwann, Devreker David, Wacquet Guillaume, Navon Maxime (2026). Projet EMOI. Effets de l'Eolien en Mer sur les écosystèmes marins pélagiques, vers une Observation Intégrée . Livrable intermédiaire. RST ODE/COAST/LERN/26-04 . https://archimer.ifremer.fr/doc/01007/111911/
ICES (2025). Working Group on Cumulative Effects Assessment Approaches in Management (WGCEAM; outputs from 2024 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 7(16), 51pp. https://doi.org/10.17895/ices.pub.28322693 . https://archimer.ifremer.fr/doc/00935/104704/
ICES (2025). Working Group on Cumulative Effects Assessment Approaches in Management (WGCEAM; outputs from 2024 meeting) . ICES Scientific Reports/Rapports scientifiques du CIEM , 7(16), 51pp. Publisher's official version : https://doi.org/10.17895/ices.pub.28322693 , Open Access version : https://archimer.ifremer.fr/doc/00935/104704/